Article

Graspot: A graph attention network for spatial transcriptomics data integration with optimal transport

2024-02-05

Abstract excerpt

Spatial transcriptomics (ST) technologies enable the measurement of mRNA expression while simultaneously capturing spot locations. By integrating ST data, the 3D structure of a tissue can be reconstructed, yielding a comprehensive understanding of the tissue’s intricacies. Nevertheless, a computational challenge persists: how to remove batch effects while preserving genuine biological structure variations across S...

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Literature Corpus work: 99c001b2-0f04-5642-84ac-f4cc0e106491
DOI: 10.1101/2024.02.01.578505

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