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nf-core/cnvflow: A Robust Nextflow Pipeline for Reproducible CNV Detection from Exome Data

2026-02-17

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<title>Abstract</title> <p>Copy number variation (CNV) analysis plays a vital role in uncovering genomic alterations linked to disease. However, CNV detection workflows remain fragmented and often lack reproducibility. We present nf-core/cnvflow, a robust and reproducible Nextflow-based pipeline designed for read-depth-based CNV detection from exome data. The pipeline integrates four established CNV tools (CNVkit...

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Literature Corpus work: 96b0ccb9-38c3-5cd3-917c-a671ce7ccc20
DOI: 10.21203/rs.3.rs-8713056/v1

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