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Article

CNVpytor: a tool for copy number variation detection and analysis from read depth and allele imbalance in whole-genome sequencing.

GigaScience - 18 Nov 2021

Suvakov Milovan, Panda Arijit, Diesh Colin, Holmes Ian, Abyzov Alexej

Abstract excerpt

BACKGROUND: Detecting copy number variations (CNVs) and copy number alterations (CNAs) based on whole-genome sequencing data is important for personalized genomics and treatment. CNVnator is one of the most popular tools for CNV/CNA discovery and analysis based on read depth. FINDINGS: Herein, we present an extension of CNVnator developed in Python-CNVpytor. CNVpytor inherits the reimplemented core engine of its...

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Identifiers

PMID: 34817058
DOI: 10.1093/gigascience/giab074
PMCID: PMC8612020

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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