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Average Nucleotide Identity based <i>Staphylococcus aureus</i> strain grouping allows identification of strain-specific genes in the pangenome

2024-02-01

Abstract excerpt

Staphylococcus aureus causes both hospital and community acquired infections in humans worldwide. Due to the high incidence of infection S. aureus is also one of the most sampled and sequenced pathogens today, providing an outstanding resource to understand variation at the bacterial subspecies level. We processed and downsampled 83,383 public S. aureus Illumina whole genome shotgun sequences and 1,263 complete...

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Literature Corpus work
945decef-f430-5be0-b2da-fe677f2ed93d
DOI
10.1101/2024.01.29.577756
Open publication

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Average Nucleotide Identity based <i>Staphylococcus aureus</i> strain grouping allows identification of strain-specific genes in the pangenomeDOI 10.1101/2024.01.29.577756
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