BioML-bench: Evaluation of AI Agents for End-to-End Biomedical ML

Abstract excerpt

Large language model (LLM) agents hold promise for accelerating biomedical research and development (R&D). Several biomedical agents have recently been proposed, but their evaluation has largely been restricted to question answering (e.g., LAB-Bench) or narrow bioinformatics tasks. Presently, there remains a lack of benchmarks evaluating agent capability in multi-step data analysis workflows or in solving the mach...

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• Diagnosis, Differential
• Phenotype
• Rare Diseases

Identifiers and source

Literature Corpus work

8d150b02-2a53-5dad-8787-84efa307379d

DOI

10.1101/2025.09.01.673319