Article

The Allen Cell and Structure Segmenter: a new open source toolkit for segmenting 3D intracellular structures in fluorescence microscopy images

2018-12-08

Abstract excerpt

A continuing challenge in quantitative cell biology is the accurate and robust 3D segmentation of structures of interest from fluorescence microscopy images in an automated, reproducible, and widely accessible manner for subsequent interpretable data analysis. We describe the Allen Cell and Structure Segmenter (Segmenter), a Python-based open source toolkit developed for 3D segmentation of cells and intracellular...

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Literature Corpus work: 84715ddd-1b2a-527d-9b86-7002da18c082
DOI: 10.1101/491035

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