3DCellComposer - A Versatile Pipeline Utilizing 2D Cell Segmentation Methods for 3D Cell Segmentation

Abstract excerpt

<h4>Background</h4> Cell segmentation is crucial in bioimage informatics, as its accuracy directly impacts conclusions drawn from cellular analyses. While many approaches to 2D cell segmentation have been described, 3D cell segmentation has received much less attention. 3D segmentation faces significant challenges, including limited training data availability due to the difficulty of the task for human annotators...

Topics

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• Algorithms
• Cell Nucleus
• Cluster Analysis
• Deep Learning
• Image Processing, Computer-Assisted
• Machine Learning
• Neural Networks, Computer
• Phenotype

Identifiers and source

Literature Corpus work

066d41cb-3b02-5bbc-9c42-9fccc7d441a7

DOI

10.1101/2024.03.08.584082