Back to search

Article

FreeClimber: Automated quantification of climbing performance in <i>Drosophila</i> , with examples from mitonuclear genotypes

2020-07-04

Abstract excerpt

Negative geotaxis (climbing) performance is a useful metric for quantifying Drosophila health and vigor. Manual methods to quantify climbing performance are slow, tedious, and may be systematically biased, while available computational methods have inflexible hardware or software requirements. We present an alternative: FreeClimber. This open source, Python-based pipeline subtracts a video’s static background to...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work
6bcc4011-4cef-59dd-95c3-5f093b04457d
DOI
10.1101/2020.07.04.187898
Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest
Interactive article relationship graphSelect a related publication card to move it into the centre and load its closest explainable connections. Solid lines are source-backed structured connections. Dashed lines are semantic discovery signals and are not scientific evidence.
FreeClimber: Automated quantification of climbing performance in <i>Drosophila</i> , with examples from mitonuclear genotypesDOI 10.1101/2020.07.04.187898
High-resolution, high-throughput analysis of <i>Drosophila</i> geotactic behaviorSemantic proximity
SAMBA: A Segment Anything Model-based tool for semi-automated Behavioural Analysis of <i>Drosophila</i> and other model organismsSemantic proximity
Flow zoometry of <i>Drosophila</i>Semantic proximity
A Segment Anything Model-based tool for semi-automated behavioural analysis of Drosophila and other model organisms.Semantic proximity
CASTLE: a training-free foundation-model pipeline for cross-species behavioral classificationSemantic proximity
TAXISCAN, Optimizing throughput and behavioral depth in standard <i>C. elegans</i> chemotaxis assaysSemantic proximity
Comparative Analysis of Experimental Methods to Quantify Animal Activity in Caenorhabditis elegans Models of Mitochondrial Disease.Semantic proximity
MLDAAPP: machine learning data acquisition for assessing population phenotypes.Semantic proximity
Exercise-induced changes in climbing performanceSemantic proximity
Assessing motor-related phenotypes of Caenorhabditis elegans with the wide field-of-view nematode tracking platform.Semantic proximity
An Automated Rapid Iterative Negative Geotaxis Assay for Analyzing Adult Climbing Behavior in a Drosophila Model of NeurodegenerationSemantic proximity
Quantitative Analysis of Climbing Defects in a Drosophila Model of Neurodegenerative DisordersSemantic proximity
Select a neighboring publication to make it the new centre.