Article

Detailed curation of biological samples and experimental designs for genomics using LLM-supported agentic workflows

2026-08-02

Abstract excerpt

We describe an automated software tool to accomplish data curation tasks previously performed by humans for the Gemma genomics data re-analysis resource. Gemma is a hand-curated database of reprocessed transcriptomic studies, currently covering over 23,000 human, mouse and rat data sets largely drawn from the Gene Expression Omnibus (GEO). We developed a pipeline that uses both traditional (mechanical) and large-l...

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Literature Corpus work: 622bf056-f360-5379-9d9a-54c724b0037d
DOI: 10.64898/2026.07.30.741874

Open publication

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