Article

Cellquant: a vibecoder’s guide to image analysis

2026-03-09

Abstract excerpt

Quantitative fluorescence microscopy is central to modern cell biology, yet extracting reproducible measurements from images remains a bottleneck for biologists without programming experience. Here we present cellquant , a single-script command line pipeline for multi-channel fluorescence images that performs cell segmentation, puncta quantification, colocalization analysis, and spatial proximity measurements. Be...

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Literature Corpus work: 5fbb92b6-0dfe-526a-b574-25de611278d8
DOI: 10.64898/2026.03.09.710634

Open publication

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