Article

Metatranscriptome profiling of the dynamic transcription of mRNA and sRNA of a probiotic <i>Lactobacillus</i> strain in human gut

2018-10-14

Abstract excerpt

Metatranscriptomic sequencing has recently been applied to study how pathogens and probiotics affect human gastrointestinal (GI) tract microbiota, which provides new insights into their mechanisms of action. In this study, metatranscriptomic sequencing was applied to deduce the in vivo expression patterns of an ingested Lactobacillus casei strain, which was compared with its in vitro growth transcriptomes. Extr...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 5949c157-9b44-5693-b421-a06948990152
DOI: 10.1101/442673

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Metatranscriptome profiling of the dynamic transcription of mRNA and sRNA of a probiotic <i>Lactobacillus</i> strain in human gutDOI 10.1101/442673Read

Probiotic-directed modulation of gut microbiota is basal microbiome dependentSemantic proximity Read

Relating the metatranscriptome and metagenome of the human gutSemantic proximity Read

A long and abundant non-coding RNA in Lactobacillus salivariusSemantic proximity Read

Comparative genome analysis of Lactobacillus casei strains isolated from Actimel and Yakult products reveals marked similarities and points to a common origin.Semantic proximity Read

Improved gut microbiome recovery following drug therapy is linked to abundance and replication of probiotic strainsSemantic proximity Read

An RNA regulates iron homeostasis and host mucus colonization in <i>Bacteroides thetaiotaomicron</i>Semantic proximity Read

Metanacentome: A genomic methodology proposal for the study of nascent metatranscription of the microbiomeSemantic proximity Read

Multiomics analysis reveals the biological effects of live Roseburia intestinalis as a high-butyrate-producing bacterium in human intestinal epithelial cellsSemantic proximity Read

<i>Bifidobacterium longum</i> subsp <i>. longum</i> BG-L47 boosts growth and activity of <i>Limosilactobacillus reuteri</i> DSM 17938 and its extracellular membrane vesiclesSemantic proximity Read

The Impact of Lactobacillus casei on the Composition of the Cecal Microbiota and Innate Immune System Is Strain SpecificSemantic proximity Read

<i>Lactobacillus casei</i>Shirota intervention modulates the esophageal microbiome composition in Barrett’s esophagusSemantic proximity Read

Functional genomics of Lactobacillus casei establishment in the gut.Semantic proximity Read