Back to search

Article

WebAtlas pipeline for integrated single cell and spatial transcriptomic data

2023-05-22

Abstract excerpt

Single cell and spatial transcriptomics illuminate complementary features of tissues. However, online dissemination and exploration of integrated datasets is challenging due to the heterogeneity and scale of data. We introduce the WebAtlas pipeline for user-friendly sharing and interactive navigation of integrated datasets. WebAtlas unifies commonly used atlassing technologies into the cloud-optimised Zarr format...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work
41d7352c-5656-5441-96a2-4c373edd701f
DOI
10.1101/2023.05.19.541329
Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest
Interactive article relationship graphSelect a related publication card to move it into the centre and load its closest explainable connections. Solid lines are source-backed structured connections. Dashed lines are semantic discovery signals and are not scientific evidence.
WebAtlas pipeline for integrated single cell and spatial transcriptomic dataDOI 10.1101/2023.05.19.541329
Select a neighboring publication to make it the new centre.