Back to search

Article

CoxBase: an online platform for epidemiological surveillance, visualization, analysis and typing of <i>Coxiella burnetii</i> genomic sequences

2020-11-30

Abstract excerpt

<h4>ABSTRACT</h4> Q (query) fever is an infectious zoonotic disease caused by the Gram-negative bacteria Coxiella burnetii . Although the disease has been studied since decades, it still represents a threat due to sporadic outbreaks across farms in Europe. The absence of a central platform for Coxiella typing data management in an important epidemiological gap which is relevant in the case of an outbreak. To fi...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work
25570f60-df8c-52f9-852c-1210f862bbc2
DOI
10.1101/2020.11.29.402362
Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest
Interactive article relationship graphSelect a related publication card to move it into the centre and load its closest explainable connections. Solid lines are source-backed structured connections. Dashed lines are semantic discovery signals and are not scientific evidence.
CoxBase: an online platform for epidemiological surveillance, visualization, analysis and typing of <i>Coxiella burnetii</i> genomic sequencesDOI 10.1101/2020.11.29.402362
CoxBase: an Online Platform for Epidemiological Surveillance, Visualization, Analysis, and Typing of Coxiella burnetii Genomic SequencesSemantic proximity
Correlating Genotyping Data of Coxiella burnetii with Genomic GroupsSemantic proximity
ReporTree: a surveillance-oriented tool to strengthen the linkage between pathogen genetic clusters and epidemiological dataSemantic proximity
ReporTree: a surveillance-oriented tool to strengthen the linkage between pathogen genetic clusters and epidemiological dataSemantic proximity
Genetic diversity of the Q fever agent, Coxiella burnetii, assessed by microarray-based whole-genome comparisons.Semantic proximity
Genetic Diversity, Phylogenetic Structure, and Assessment of the Zoonotic Potential of <em>Coxiella burnetii</em> Strains Circulating in AfricaSemantic proximity
Molecular typing of Coxiella burnetii (Q fever).Semantic proximity
Genetic Diversity, Phylogenetic Structure, and Assessment of the Zoonotic Potential of <em>Coxiella burnetii </em>Strains Circulating in Africa: Review StudySemantic proximity
Genome characteristics and type IV effector protein repertoire of Coxiella burnetii depend rather on Genomic Groups than on host speciesSemantic proximity
Rapid typing of Coxiella burnetii.Semantic proximity
Genomic epidemiology and strain taxonomy of <i>Corynebacterium diphtheriae</i>Semantic proximity
Real-time analysis and visualization of pathogen sequence dataSemantic proximity
Select a neighboring publication to make it the new centre.