Article

Discovering disease-causing pathogens in resource-scarce Southeast Asia using a global metagenomic pathogen monitoring system

2021-09-28

Abstract excerpt

Understanding the regional pathogen landscape and surveillance of emerging pathogens is key to mitigating epidemics. Challenges lie in resource-scarce settings, where outbreaks are likely to emerge, but where laboratory diagnostics and bioinformatics capacity are limited. Using unbiased metagenomic next generation sequencing (mNGS), we identified a variety of vector-borne, zoonotic and emerging pathogens responsib...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 22d4d4cc-ea5c-5db0-9dac-32e226c1ab17
DOI: 10.1101/2021.09.25.21262905

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Discovering disease-causing pathogens in resource-scarce Southeast Asia using a global metagenomic pathogen monitoring systemDOI 10.1101/2021.09.25.21262905Read

Discovering disease-causing pathogens in resource-scarce Southeast Asia using a global metagenomic pathogen monitoring systemSemantic proximity Read

Pathogen Genomic Surveillance in Asia: A Multi-Country AssessmentSemantic proximity Read

Metagenomic surveillance uncovers diverse and novel viral taxa in febrile patients from NigeriaSemantic proximity Read

Viral metagenomic sequencing in a cohort of international travellers returning with febrile illnessSemantic proximity Read

Metagenomic next-generation sequencing aids the diagnosis of viral infections in febrile returning travellersSemantic proximity Read

Pathogen genomic surveillance status among lower resource settings in AsiaSemantic proximity Read

Rapid metagenomic characterization of a case of imported COVID-19 in CambodiaSemantic proximity Read

Unbiased metagenomic sequencing for pediatric meningitis in Bangladesh reveals neuroinvasive Chikungunya virus outbreak and other unrealized pathogensSemantic proximity Read

Metagenomic Next-Generation Sequencing Improves Pathogen Detection and Rational Use in Patients with Infectious Fever: A Retrospective StudySemantic proximity Read

Virus Identification in Unknown Tropical Febrile Illness Cases Using Deep SequencingSemantic proximity Read

Employing Metagenomic Next-Generation Sequencing for Enhanced Surveillance of Respiratory Viruses in Fever Clinics: A Comparative Analysis in the Context of the COVID-19 Pandemic in a General HospitalSemantic proximity Read

Metagenomic next-generation sequencing to characterize etiologies of non-malarial fever in a cohort living in a high malaria burden area of UgandaSemantic proximity Read