Article

Phylogenize2: robust phylogenetic methods link genes to phenotypes across host-associated and environmental microbiomes

2026-07-16

Abstract excerpt

In microbiome studies, associations between microbial functions and the environment are often confounded by phylogeny. While some methods explicitly account for this confounder, they require information about genome content, limiting their use in biomes where few genomes have been available. To make these methods more universally accessible, we have developed Phylogenize2, a redesigned phylogeny-aware tool for lin...

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Literature Corpus work: 13cd8b37-d898-5659-b090-16054af5ba97
DOI: 10.64898/2026.07.15.738685

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