Article
R2DT: a comprehensive platform for visualizing RNA secondary structure.
Nucleic acids research - 8 Feb 2025
McCann Holly, Meade Caeden D, Williams Loren Dean, Petrov Anton S, Johnson Philip Z, Simon Anne E, Hoksza David, Nawrocki Eric P, Chan Patricia P, Lowe Todd M, Ribas Carlos Eduardo, Sweeney Blake A, Madeira Fábio, Anyango Stephen, Appasamy Sri Devan, Deshpande Mandar, Varadi Mihaly, Velankar Sameer, Zirbel Craig L, Naiden Aleksei, Jossinet Fabrice, Petrov Anton I
Abstract excerpt
RNA secondary (2D) structure visualization is an essential tool for understanding RNA function. R2DT is a software package designed to visualize RNA 2D structures in consistent, recognizable, and reproducible layouts. The latest release, R2DT 2.0, introduces multiple significant features, including the ability to display position-specific information, such as single nucleotide polymorphisms or SHAPE reactivities....
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