Article
Active learning-assisted directed evolution.
Nature communications - 16 Jan 2025
Yang Jason, Lal Ravi G, Bowden James C, Astudillo Raul, Hameedi Mikhail A, Kaur Sukhvinder, Hill Matthew, Yue Yisong, Arnold Frances H
Abstract excerpt
Directed evolution (DE) is a powerful tool to optimize protein fitness for a specific application. However, DE can be inefficient when mutations exhibit non-additive, or epistatic, behavior. Here, we present Active Learning-assisted Directed Evolution (ALDE), an iterative machine learning-assisted DE workflow that leverages uncertainty quantification to explore the search space of proteins more efficiently than...
Read the complete abstract on PubMedTopics
- Directed Molecular Evolution
- Protein Engineering
- Problem-Based Learning
- Mutation
- Machine Learning
- Catalytic Domain
