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MhGeneS: An Analytical Pipeline to Allow for Robust Microhaplotype Genotyping.

Molecular ecology resources - 1 Jan 2025

Geue Julia C, Liu Peng, Keobouasone Sonesinh, Wilson Paul, Manseau Micheline

Abstract excerpt

Microhaplotypes are small linked genomic regions comprising two or more single-nucleotide polymorphisms (SNPs) that are being applied in forensics and are emerging in wildlife monitoring studies and genomic epidemiology. Typically, targeted in non-coding regions, microhaplotypes in exonic regions can be designed with larger amplicons to capture functional non-synonymous sites and minimise insertion/deletion...

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PMID: 39364855
DOI: 10.1111/1755-0998.14027
PMCID: PMC11646296

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