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Article

PyPop: a mature open-source software pipeline for population genomics.

Frontiers in immunology - 1 Jan 2024

Lancaster Alexander K, Single Richard M, Mack Steven J, Sochat Vanessa, Mariani Michael P, Webster Gordon D

Abstract excerpt

Python for Population Genomics (PyPop) is a software package that processes genotype and allele data and performs large-scale population genetic analyses on highly polymorphic multi-locus genotype data. In particular, PyPop tests data conformity to Hardy-Weinberg equilibrium expectations, performs Ewens-Watterson tests for selection, estimates haplotype frequencies, measures linkage disequilibrium, and tests...

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Identifiers

PMID: 38629078
DOI: 10.3389/fimmu.2024.1378512
PMCID: PMC11019567

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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