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How much should we sequence? An analysis of the Swiss SARS-CoV-2 surveillance effort

18 Mar 2024

Abstract excerpt

During the SARS-CoV-2 pandemic, many countries directed substantial resources toward genomic surveillance to detect and track viral variants. There is a debate over how much sequencing effort is necessary in national surveillance programs for SARS-CoV-2 and future pandemic threats. We aimed to investigate the effect of reduced sequencing on surveillance outcomes in a large genomic data set from Switzerland,...

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PMID: 38497714
DOI: 10.1128/spectrum.03628-23

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