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Article

TCGAplot: an R package for integrative pan-cancer analysis and visualization of TCGA multi-omics data.

BMC bioinformatics - 17 Dec 2023

Liao Chenqi, Wang Xiong

Abstract excerpt

BACKGROUND: Pan-cancer analysis examines both the commonalities and heterogeneity among genomic and cellular alterations across numerous types of tumors. Pan-cancer analysis of gene expression, tumor mutational burden (TMB), microsatellite instability (MSI), and tumor immune microenvironment (TIME), and methylation becomes available based on the multi-omics data from The Cancer Genome Atlas Program (TCGA). Some...

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Identifiers

PMID: 38105215
DOI: 10.1186/s12859-023-05615-3
PMCID: PMC10726608

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