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Leveraging explainable AI for gut microbiome-based colorectal cancer classification

9 Feb 2023

Abstract excerpt

Studies have shown a link between colorectal cancer (CRC) and gut microbiome compositions. In these studies, machine learning is used to infer CRC biomarkers using global explanation methods. While these methods allow the identification of bacteria generally correlated with CRC, they fail to recognize species that are only influential for some individuals. In this study, we investigate the potential of Shapley...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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PMID: 36759888
DOI: 10.1186/s13059-023-02858-4

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