Article
Klarigi: Characteristic explanations for semantic biomedical data.
Computers in biology and medicine - 1 Feb 2023
Slater Karin, Williams John A, Schofield Paul N, Russell Sophie, Pendleton Samantha C, Karwath Andreas, Fanning Hilary, Ball Simon, Hoehndorf Robert, Gkoutos Georgios V
Abstract excerpt
Annotation of biomedical entities with ontology classes provides for formal semantic analysis and mobilisation of background knowledge in determining their relationships. To date, enrichment analysis has been routinely employed to identify classes that are over-represented in annotations across sets of groups, such as biosample gene expression profiles or patient phenotypes, and is useful for a range of tasks...
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