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Article

Graph-based pangenomics maximizes genotyping density and reveals structural impacts on fungal resistance in melon.

Nature communications - 22 Dec 2022

Vaughn Justin N, Branham Sandra E, Abernathy Brian, Hulse-Kemp Amanda M, Rivers Adam R, Levi Amnon, Wechter William P

Abstract excerpt

The genomic sequences segregating in experimental populations are often highly divergent from the community reference and from one another. Such divergence is problematic under various short-read-based genotyping strategies. In addition, large structural differences are often invisible despite being strong candidates for causal variation. These issues are exacerbated in specialty crop breeding programs with...

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Identifiers

PMID: 36550124
DOI: 10.1038/s41467-022-35621-7
PMCID: PMC9780226

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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