Automated assembly scaffolding using RagTag elevates a new tomato system for high-throughput genome editing.

Abstract excerpt

Advancing crop genomics requires efficient genetic systems enabled by high-quality personalized genome assemblies. Here, we introduce RagTag, a toolset for automating assembly scaffolding and patching, and we establish chromosome-scale reference genomes for the widely used tomato genotype M82 along with Sweet-100, a new rapid-cycling genotype that we developed to accelerate functional genomics and genome editing...

Topics

Share this publication in a Topic to start or enrich a Post.

• Share to Gene Editing
• Share to Genome