Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Reference Guided De Novo Genome Assembly of Transformation Pliable Solanum lycopersicum cv. Pusa Ruby.

Genes - 24 Feb 2023

Vats Sanskriti, Kumar Virender, Mandlik Rushil, Patil Gunvant, Sonah Humira, Roy Joy, Sharma Tilak Raj, Deshmukh Rupesh

Abstract excerpt

Solanum lycopersicum cv. Pusa Ruby (PR) is a superior tomato cultivar routinely used as a model tomato variety. Here, we report a reference-guided genome assembly for PR, covering 97.6% of the total single-copy genes in the solanales order. The PR genome contains 34,075 genes and 423,288 variants, out of which 127,131 are intragenic and 1232 are of high impact. The assembly was packaged according to PanSol...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Fruit
Share to Genomics
Share to Mutation

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Solanum lycopersicum

Source

Open in PubMed Open full text

Identifiers

PMID: 36980842
DOI: 10.3390/genes14030570
PMCID: PMC10047940

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 1 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Reference Guided De Novo Genome Assembly of Transformation Pliable Solanum lycopersicum cv. Pusa Ruby.PMID 36980842Read ↗

Genome sequence and analysis of the eggplant ( <i>Solanum melongena</i> L.)Semantic proximity Read ↗

The tomato genome sequence provides insights into fleshy fruit evolution.Semantic proximity Read ↗

Unlocking the Genetic Potential of <i>Solanum bulbocastanum</i> (SB22, Selection 22): A Valuable Resource for Enhancing Disease Resistance in Commercial Potato CultivarsSemantic proximity Read ↗

Improved genome assembly and pan-genome provide key insights into eggplant domestication and breeding.Semantic proximity Read ↗

A high-continuity and annotated tomato reference genomeSemantic proximity Read ↗

Patchwork sequencing of tomato San Marzano and Vesuviano varieties highlights genome-wide variations.Semantic proximity Read ↗

A High-continuity and Annotated Tomato Reference GenomeSemantic proximity Read ↗

Whole genome resequencing of four Italian sweet pepper landraces provides insights on sequence variation in genes of agronomic value.Semantic proximity Read ↗

Reference genome assembly of a tetraploid accession of the tuber crop <i>Tropaeolum tuberosum</i>Semantic proximity Read ↗

Genome assembly of six polyploid potato genomes.Semantic proximity Read ↗

Genomic analysis of the native European Solanum species, S. dulcamara.Semantic proximity Read ↗

Engineering homoeologs provide a fine scale for quantitative traits in polyploid.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.