Article
Statistical phasing of 150,119 sequenced genomes in the UK Biobank.
American journal of human genetics - 5 Jan 2023
Browning Brian L, Browning Sharon R
Abstract excerpt
The first release of UK Biobank whole-genome sequence data contains 150,119 genomes. We present an open-source pipeline for filtering, phasing, and indexing these genomes on the cloud-based UK Biobank Research Analysis Platform. This pipeline makes it possible to apply haplotype-based methods to UK Biobank whole-genome sequence data. The pipeline uses BCFtools for marker filtering, Beagle for genotype phasing,...
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