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High-resolution species assignment of Anopheles mosquitoes using k-mer distances on targeted sequences

12 Oct 2022

Abstract excerpt

The ANOSPP amplicon panel is a genus-wide targeted sequencing panel to facilitate large-scale monitoring of Anopheles species diversity. Combining information from the 62 nuclear amplicons present in the ANOSPP panel allows for a more senstive and specific species assignment than single gene (e.g. COI) barcoding, which is desirable in the light of permeable species boundaries. Here, we present NNoVAE, a method...

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PMID: 36222650
DOI: 10.7554/elife.78775

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