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Energetics of Spike Protein Opening of SARS-CoV-1 and SARS-CoV-2 and Its Variants of Concern: Implications in Host Receptor Scanning and Transmission.

Biochemistry - 18 Oct 2022

Singh Jasdeep, Vashishtha Shubham, Rahman Syed Asad, Ehtesham Nasreen Zafar, Alam Anwar, Kundu Bishwajit, Dobrindt Ulrich

Abstract excerpt

The receptor binding domain(s) (RBD) of spike (S) proteins of SARS-CoV-1 and SARS-CoV-2 (severe acute respiratory syndrome coronavirus) undergoes closed to open transition to engage with host ACE2 receptors. In this study, using multi atomistic (equilibrium) and targeted (non-equilibrium) molecular dynamics simulations, we have compared energetics of RBD opening pathways in full-length (modeled from cryo-EM...

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Amino Acids
Angiotensin-Converting Enzyme 2
Binding Sites
COVID-19
Peptidyl-Dipeptidase A

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Protein Binding

Spike Glycoprotein, Coronavirus

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PMID: 36166360
DOI: 10.1021/acs.biochem.2c00301

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 1 Sept 2026.

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