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Article

CancerBERT: a cancer domain-specific language model for extracting breast cancer phenotypes from electronic health records.

Journal of the American Medical Informatics Association : JAMIA - 14 Jun 2022

Zhou Sicheng, Wang Nan, Wang Liwei, Liu Hongfang, Zhang Rui

Abstract excerpt

OBJECTIVE: Accurate extraction of breast cancer patients' phenotypes is important for clinical decision support and clinical research. This study developed and evaluated cancer domain pretrained CancerBERT models for extracting breast cancer phenotypes from clinical texts. We also investigated the effect of customized cancer-related vocabulary on the performance of CancerBERT models. MATERIALS AND METHODS: A...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 35333345
DOI: 10.1093/jamia/ocac040
PMCID: PMC9196678

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026.

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