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SAM-TB: a whole genome sequencing data analysis website for detection of <i>Mycobacterium tuberculosis</i> drug resistance and transmission

25 Jan 2022

Abstract excerpt

Whole genome sequencing (WGS) can provide insight into drug-resistance, transmission chains and the identification of outbreaks, but data analysis remains an obstacle to its routine clinical use. Although several drug-resistance prediction tools have appeared, until now no website integrates drug-resistance prediction with strain genetic relationships and species identification of nontuberculous mycobacteria...

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PMID: 35211720
DOI: 10.1093/bib/bbac030

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