Article
Viral surface geometry shapes influenza and coronavirus spike evolution through antibody pressure.
PLoS computational biology - 1 Dec 2021
Amitai Assaf
Abstract excerpt
The evolution of circulating viruses is shaped by their need to evade antibody response, which mainly targets the viral spike. Because of the high density of spikes on the viral surface, not all antigenic sites are targeted equally by antibodies. We offer here a geometry-based approach to predict and rank the probability of surface residues of SARS spike (S protein) and influenza H1N1 spike (hemagglutinin) to...
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