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A PostgreSQL Tripal solution for large-scale genotypic and phenotypic data.

Database : the journal of biological databases and curation - 14 Aug 2021

Sanderson Lacey-Anne, Caron Carolyn T, Tan Reynold L, Bett Kirstin E

Abstract excerpt

Researchers are seeking cost-effective solutions for management and analysis of large-scale genotypic and phenotypic data. Open-source software is uniquely positioned to fill this need through user-focused, crowd-sourced development. Tripal, an open-source toolkit for developing biological data web portals, uses the GMOD Chado database schema to achieve flexible, ontology-driven storage in PostgreSQL. Tripal also...

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Identifiers

PMID: 34389844
DOI: 10.1093/database/baab051
PMCID: PMC8363843

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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