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Misclassifications in human papillomavirus databases

11 Mar 2021

Abstract excerpt

We assessed the quality of human papillomavirus (HPV) sequences in GenBank by analyzing the possible presence of chimeras, "wrong-assembled" contigs and errors in taxonomy using an open-source script (HPVChimera_Gb) that compared 25 638 HPV-related nucleotide sequences in GenBank with the 221 numbered HPV types and another 220 complete HPV sequences. There were 110 sequences with taxonomy/naming errors (sequences...

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PMID: 33730650
DOI: 10.1016/j.virol.2021.03.002

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