Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

AVIA 3.0: interactive portal for genomic variant and sample level analysis.

Bioinformatics (Oxford, England) - 25 Aug 2021

Reardon Hue V, Che Anney, Luke Brian T, Ravichandran Sarangan, Collins Jack R, Mudunuri Uma S

Abstract excerpt

SUMMARY: The Annotation, Visualization and Impact Analysis (AVIA) is a web application combining multiple features to annotate and visualize genomic variant data. Users can investigate functional significance of their genetic alterations across samples, genes and pathways. Version 3.0 of AVIA offers filtering options through interactive charts and by linking disease relevant data sources. Newly incorporated...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Databases, Genetic
Share to Genetic Variation
Share to Genome

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genomics

Share to Internet

Share to Software

Source

Open in PubMed Open full text

Identifiers

PMID: 33289511
DOI: 10.1093/bioinformatics/btaa994
PMCID: PMC8388034

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

AVIA 3.0: interactive portal for genomic variant and sample level analysis.PMID 33289511Read ↗

AVIA v2.0: annotation, visualization and impact analysis of genomic variants and genes.Semantic proximity Read ↗

AVIA: an interactive web-server for annotation, visualization and impact analysis of genomic variations.Semantic proximity Read ↗

ACVI-Med, an open source variant interpretation tool for medical genomics.Semantic proximity Read ↗

CRAVAT 4: Cancer-Related Analysis of Variants ToolkitSemantic proximity Read ↗

Variant Review with the Integrative Genomics Viewer.Semantic proximity Read ↗

Genome Nexus: A Comprehensive Resource for the Annotation and Interpretation of Genomic Variants in Cancer.Semantic proximity Read ↗

VariantAnnotation: a Bioconductor package for exploration and annotation of genetic variants.Semantic proximity Read ↗

VarXOmics: A Versatile Web Server for Genomic Data Querying, Analysis, and Variant Prioritization With Multi-omics Insights.Semantic proximity Read ↗

Variant graph craft (VGC): a comprehensive tool for analyzing genetic variation and identifying disease-causing variants.Semantic proximity Read ↗

Clinical analysis and interpretation of cancer genome data.Semantic proximity Read ↗

FAVOR 2.0: A reengineered functional annotation of variants online resource for interpreting genomic variation.Semantic proximity Read ↗

VarSome: The Human Genomic Variant Search EngineSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.