Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

A snapshot of diversity: Intraclonal variation of Escherichia coli clones as commensals and pathogens.

International journal of medical microbiology : IJMM - 1 Apr 2020

Stegger Marc, Leihof Rikke Fleron, Baig Sharmin, Sieber Raphael N, Thingholm Karen Rønø, Marvig Rasmus L, Frimodt-Møller Niels, Nielsen Karen Leth

Abstract excerpt

Whole-genome sequencing has enabled detailed studies on bacterial evolution during infection, but there is limited knowledge on intraclonal variation. In this study, we sought to provide a snapshot of the intraclonal diversity of Escherichia coli as both commensal in the faecal environment and pathogen during urinary tract infection, respectively. This was performed by whole-genome sequencing and analyses of...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Escherichia coli
Share to Escherichia coli Infections

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genome, Bacterial

Share to Rectum

Share to Symbiosis

Share to Urinary Tract Infections

Share to Whole Genome Sequencing

Source

Identifiers

PMID: 32037036
DOI: 10.1016/j.ijmm.2020.151401

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 2 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

A snapshot of diversity: Intraclonal variation of Escherichia coli clones as commensals and pathogens.PMID 32037036Read ↗

Molecular and evolutionary bases of within-patient genotypic and phenotypic diversity in Escherichia coli extraintestinal infections.Semantic proximity Read ↗

<i>Escherichia coli</i> clonobiome: assessing the strains diversity in feces and urine by deep amplicon sequencingSemantic proximity Read ↗

The bacterial genetic determinants of <i>Escherichia coli</i> capacity to cause bloodstream infections in humansSemantic proximity Read ↗

Population Phylogenomics of Extraintestinal Pathogenic Escherichia coli.Semantic proximity Read ↗

The darkest place is under the candlestick - healthy urogenital tract as a source of UTI-related <i>Escherichia coli</i> lineagesSemantic proximity Read ↗

Pangenome evolution in <i>Escherichia coli</i> is sequence type, not phylogroup, specificSemantic proximity Read ↗

Phylogenetic background and habitat drive the genetic diversification of Escherichia coli.Semantic proximity Read ↗

The microbial ecology of <i>Escherichia coli</i> in the vertebrate gutSemantic proximity Read ↗

Aspects of genome plasticity in pathogenic Escherichia coli.Semantic proximity Read ↗

Strain intrinsic properties and environmental constraints together shape Escherichia coli dynamics and diversity over a twenty-year human gut time seriesSemantic proximity Read ↗

Decomposition of the pangenome matrix reveals a structure in gene distribution in the Escherichia coli species.Semantic proximity Read ↗

Large-scale genomic sequencing of extraintestinal pathogenic Escherichia coli strains.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.