Article
Two-dimensional site frequency spectrum for detecting, classifying and dating incomplete selective sweeps.
Genes & genetic systems - 30 Jan 2020
Satta Yoko, Zheng Wanjing, Nishiyama Kumiko V, Iwasaki Risa L, Hayakawa Toshiyuki, Fujito Naoko T, Takahata Naoyuki
Abstract excerpt
The two-dimensional site frequency spectrum (2D SFS) was investigated to describe the intra-allelic variability (IAV) maintained within a derived allele (D) group that has undergone an incomplete selective sweep against an ancestral allele group. We observed that recombination certainly muddles the ancestral relationships of allelic lineages between the two allele groups; however, the 2D SFS reveals intriguing...
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