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Article

Promising prospects of nanopore sequencing for algal hologenomics and structural variation discovery.

BMC genomics - 13 Nov 2019

Sauvage Thomas, Schmidt William E, Yoon Hwan Su, Paul Valerie J, Fredericq Suzanne

Abstract excerpt

BACKGROUND: The MinION Access Program (MAP, 2014-2016) allowed selected users to test the prospects of long nanopore reads for diverse organisms and applications through the rapid development of improving chemistries. In 2014, faced with a fragmented Illumina assembly for the chloroplast genome of the green algal holobiont Caulerpa ashmeadii, we applied to the MAP to test the prospects of nanopore reads to...

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Share to Genome, Bacterial
Share to Genome, Chloroplast
Share to Genome, Mitochondrial

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genomics

Share to Nanopore Sequencing

Share to Polymorphism, Genetic

Share to Polymorphism, Single Nucleotide

Share to Sequence Analysis, DNA

Source

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Identifiers

PMID: 31722669
DOI: 10.1186/s12864-019-6248-2
PMCID: PMC6854639

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