Article
Detection of HIV transmission clusters from phylogenetic trees using a multi-state birth–death model
1 Sept 2018
Abstract excerpt
HIV patients form clusters in HIV transmission networks. Accurate identification of these transmission clusters is essential to effectively target public health interventions. One reason for clustering is that the underlying contact network contains many local communities. We present a new maximum-likelihood method for identifying transmission clusters caused by community structure, based on phylogenetic trees....
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