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Article

Evaluation of the genomic diversity of viruses infecting bacteria, archaea and eukaryotes using a common bioinformatic platform: steps towards a unified taxonomy.

The Journal of general virology - 1 Sept 2018

Aiewsakun Pakorn, Adriaenssens Evelien M, Lavigne Rob, Kropinski Andrew M, Simmonds Peter

Abstract excerpt

Genome Relationship Applied to Virus Taxonomy (GRAViTy) is a genetics-based tool that computes sequence relatedness between viruses. Composite generalized Jaccard (CGJ) distances combine measures of homology between encoded viral genes and similarities in genome organizational features (gene orders and orientations). This scoring framework effectively recapitulates the current, largely morphology and...

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Identifiers

PMID: 30016225
DOI: 10.1099/jgv.0.001110
PMCID: PMC6230767

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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