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Article

A gene-phenotype relationship extraction pipeline from the biomedical literature using a representation learning approach.

Bioinformatics (Oxford, England) - 1 Jul 2018

Xing Wenhui, Qi Junsheng, Yuan Xiaohui, Li Lin, Zhang Xiaoyu, Fu Yuhua, Xiong Shengwu, Hu Lun, Peng Jing

Abstract excerpt

Motivation: The fundamental challenge of modern genetic analysis is to establish gene-phenotype correlations that are often found in the large-scale publications. Because lexical features of gene are relatively regular in text, the main challenge of these relation extraction is phenotype recognition. Due to phenotypic descriptions are often study- or author-specific, few lexicon can be used to effectively...

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Identifiers

PMID: 29950017
DOI: 10.1093/bioinformatics/bty263
PMCID: PMC6022650

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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