Article
Localization of adaptive variants in human genomes using averaged one-dependence estimation.
Nature communications - 19 Feb 2018
Sugden Lauren Alpert, Atkinson Elizabeth G, Fischer Annie P, Rong Stephen, Henn Brenna M, Ramachandran Sohini
Abstract excerpt
Statistical methods for identifying adaptive mutations from population genetic data face several obstacles: assessing the significance of genomic outliers, integrating correlated measures of selection into one analytic framework, and distinguishing adaptive variants from hitchhiking neutral variants. Here, we introduce SWIF(r), a probabilistic method that detects selective sweeps by learning the distributions of...
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