glactools: a command-line toolset for the management of genotype likelihoods and allele counts.

Abstract excerpt

Motivation: Research projects involving population genomics routinely need to store genotyping information, population allele counts, combine files from different samples, query the data and export it to various formats. This is often done using bespoke in-house scripts, which cannot be easily adapted to new projects and seldom constitute reproducible workflows. Results: We introduce glactools, a set of...

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