Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Genotype imputation in a tropical crossbred dairy cattle population.

Journal of dairy science - 1 Dec 2017

Oliveira Júnior Gerson A, Chud Tatiane C S, Ventura Ricardo V, Garrick Dorian J, Cole John B, Munari Danísio P, Ferraz José B S, Mullart Erik, DeNise Sue, Smith Shannon, da Silva Marcos Vinícius G B

Abstract excerpt

The objective of this study was to investigate different strategies for genotype imputation in a population of crossbred Girolando (Gyr × Holstein) dairy cattle. The data set consisted of 478 Girolando, 583 Gyr, and 1,198 Holstein sires genotyped at high density with the Illumina BovineHD (Illumina, San Diego, CA) panel, which includes ∼777K markers. The accuracy of imputation from low (20K) and medium densities...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Breeding
Share to Cattle

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genotype

Share to Haplotypes

Share to Polymorphism, Single Nucleotide

Source

Identifiers

PMID: 28987572
DOI: 10.3168/jds.2017-12732

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 3 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Genotype imputation in a tropical crossbred dairy cattle population.PMID 28987572Read ↗

Strategies for single nucleotide polymorphism (SNP) genotyping to enhance genotype imputation in Gyr (Bos indicus) dairy cattle: Comparison of commercially available SNP chips.Semantic proximity Read ↗

The feasibility of using low-density marker panels for genotype imputation and genomic prediction of crossbred dairy cattle of East Africa.Semantic proximity Read ↗

Assessing the accuracy of imputation in the Gyr breed using different SNP panels.Semantic proximity Read ↗

Strategies and utility of imputed SNP genotypes for genomic analysis in dairy cattle.Semantic proximity Read ↗

Imputation accuracy from low- to medium-density SNP chips for US crossbred dairy cattle.Semantic proximity Read ↗

Within- and across-breed imputation of high-density genotypes in dairy and beef cattle from medium- and low-density genotypes.Semantic proximity Read ↗

Imputation of genotypes from different single nucleotide polymorphism panels in dairy cattle.Semantic proximity Read ↗

Genotype imputation performance in Nellore cattle across different SNP panels and software tools.Semantic proximity Read ↗

Error rate for imputation from the Illumina BovineSNP50 chip to the Illumina BovineHD chip.Semantic proximity Read ↗

Comparison of different imputation methods from low- to high-density panels using Chinese Holstein cattle.Semantic proximity Read ↗

Novel methods for genotype imputation to whole-genome sequence and a simple linear model to predict imputation accuracy.Semantic proximity Read ↗

Accuracy of genotype imputation in Nelore cattle.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.