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Article

EUPAN enables pan-genome studies of a large number of eukaryotic genomes.

Bioinformatics (Oxford, England) - 1 Aug 2017

Hu Zhiqiang, Sun Chen, Lu Kuang-Chen, Chu Xixia, Zhao Yue, Lu Jinyuan, Shi Jianxin, Wei Chaochun

Abstract excerpt

SUMMARY: Pan-genome analyses are routinely carried out for bacteria to interpret the within-species gene presence/absence variations (PAVs). However, pan-genome analyses are rare for eukaryotes due to the large sizes and higher complexities of their genomes. Here we proposed EUPAN, a eukaryotic pan-genome analysis toolkit, enabling automatic large-scale eukaryotic pan-genome analyses and detection of gene PAVs at...

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PMID: 28369371
DOI: 10.1093/bioinformatics/btx170

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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