Article
Phylodynamics on local sexual contact networks.
PLoS computational biology - 1 Mar 2017
Rasmussen David A, Kouyos Roger, Günthard Huldrych F, Stadler Tanja
Abstract excerpt
Phylodynamic models are widely used in infectious disease epidemiology to infer the dynamics and structure of pathogen populations. However, these models generally assume that individual hosts contact one another at random, ignoring the fact that many pathogens spread through highly structured contact networks. We present a new framework for phylodynamics on local contact networks based on pairwise...
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