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Article

Genome-wide Diversity and Association Mapping for Capsaicinoids and Fruit Weight in Capsicum annuum L.

Scientific reports - 30 Nov 2016

Nimmakayala Padma, Abburi Venkata L, Saminathan Thangasamy, Alaparthi Suresh B, Almeida Aldo, Davenport Brittany, Nadimi Marjan, Davidson Joshua, Tonapi Krittika, Yadav Lav, Malkaram Sridhar, Vajja Gopinath, Hankins Gerald, Harris Robert, Park Minkyu, Choi Doil, Stommel John, Reddy Umesh K

Abstract excerpt

Accumulated capsaicinoid content and increased fruit size are traits resulting from Capsicum annuum domestication. In this study, we used a diverse collection of C. annuum to generate 66,960 SNPs using genotyping by sequencing. The study identified 1189 haplotypes containing 3413 SNPs. Length of individual linkage disequilibrium (LD) blocks varied along chromosomes, with regions of high and low LD interspersed...

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PMID: 27901114
DOI: 10.1038/srep38081
PMCID: PMC5128918

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