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Phylogenetic analysis reveals that Japanese encephalitis virus genotype III is still prevalent in swine herds in Sichuan province in China.

Archives of virology - 1 Jun 2016

Wu Rui, Wang Qiao, Liu Hongming, Chai Chunxia, He Bo, Huang Xiaobo, Wen Yiping, Wen Xintian, Yan Qiguai, Ma Xiaoping, Cao Sanjie

Abstract excerpt

The genome of JEV strain SC201301, which was isolated from an aborted fetal piglet in 2013 in Sichuan province in China, was completely sequenced and phylogenetically analyzed. Sequence alignments showed that the SC201301 strain shared 97-100% sequence identity with other genotype III strains but showed less similarity to genotype I representative JEVs. Phylogenetic analysis indicated that the SC201301 strain...

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PMID: 26976139
DOI: 10.1007/s00705-016-2814-y

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

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