Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

The Characterization of Novel Tissue Microbiota Using an Optimized 16S Metagenomic Sequencing Pipeline

6 Nov 2015

Abstract excerpt

BACKGROUND: Substantial progress in high-throughput metagenomic sequencing methodologies has enabled the characterisation of bacteria from various origins (for example gut and skin). However, the recently-discovered bacterial microbiota present within animal internal tissues has remained unexplored due to technical difficulties associated with these challenging samples. RESULTS: We have optimized a specific 16S...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Clostridium difficile and Clostridium perfringens research
Share to Gut microbiota and health
Share to Microbial Community Ecology and Physiology

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Source

Identifiers

PMID: 26544955
DOI: 10.1371/journal.pone.0142334

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 5 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

The Characterization of Novel Tissue Microbiota Using an Optimized 16S Metagenomic Sequencing PipelinePMID 26544955Read ↗

Comprehensive mouse gut metagenome catalog reveals major difference to the human counterpartSemantic proximity Read ↗

Introducing Murine Microbiome Database (MMDB): A Curated Database with Taxonomic Profiling of the Healthy Mouse Gastrointestinal MicrobiomeSemantic proximity Read ↗

The Mouse Gut Microbial Biobank expands the coverage of cultured bacteriaSemantic proximity Read ↗

Analysis of metagenome-assembled genomes from the mouse gut microbiota reveals distinctive strain-level characteristicsSemantic proximity Read ↗

Functional and taxonomic comparison of mouse and human gut microbiotas using extensive culturing and metagenomicsSemantic proximity Read ↗

High Sensitivity of Shotgun Metagenomic Sequencing in Colon Tissue Biopsy by Host DNA DepletionSemantic proximity Read ↗

The Mouse Intestinal Bacterial Collection (miBC) provides host-specific insight into cultured diversity and functional potential of the gut microbiotaSemantic proximity Read ↗

Sampling of Intestinal Microbiota and Targeted Amplification of Bacterial 16S rRNA Genes for Microbial Ecologic AnalysisSemantic proximity Read ↗

A catalog of the mouse gut metagenomeSemantic proximity Read ↗

Unbiased screen for pathogens in human paraffin-embedded tissue samples by whole genome sequencing and metagenomicsSemantic proximity Read ↗

Evaluation of Bacteria and Fungi DNA Abundance in Human TissuesSemantic proximity Read ↗

MRGM: a mouse reference gut microbiome reveals a large functional discrepancy for gut bacteria of the same genus between mice and humansSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.