Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

PhytoPath: an integrative resource for plant pathogen genomics.

Nucleic acids research - 4 Jan 2016

Pedro Helder, Maheswari Uma, Urban Martin, Irvine Alistair George, Cuzick Alayne, McDowall Mark D, Staines Daniel M, Kulesha Eugene, Hammond-Kosack Kim Elizabeth, Kersey Paul Julian

Abstract excerpt

PhytoPath (www.phytopathdb.org) is a resource for genomic and phenotypic data from plant pathogen species, that integrates phenotypic data for genes from PHI-base, an expertly curated catalog of genes with experimentally verified pathogenicity, with the Ensembl tools for data visualization and analysis. The resource is focused on fungi, protists (oomycetes) and bacterial plant pathogens that have genomes that...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Databases, Genetic
Share to Genes, Bacterial

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genes, Fungal

Share to Genome, Bacterial

Share to Genome, Fungal

Share to Host-Pathogen Interactions

Share to Oomycetes

Share to Plant Diseases

Source

Open in PubMed Open full text

Identifiers

PMID: 26476449
DOI: 10.1093/nar/gkv1052
PMCID: PMC4702788

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

PhytoPath: an integrative resource for plant pathogen genomics.PMID 26476449Read ↗

PHI-base: a new database for pathogen host interactionsSemantic proximity Read ↗

PHI-base update: additions to the pathogen host interaction databaseSemantic proximity Read ↗

The Pathogen-Host Interactions database (PHI-base): additions and future developments.Semantic proximity Read ↗

PHI-base: the pathogen-host interactions database.Semantic proximity Read ↗

PHI-base: a new interface and further additions for the multi-species pathogen-host interactions database.Semantic proximity Read ↗

FungiDB: an integrated functional genomics database for fungiSemantic proximity Read ↗

Putative pathogenicity genes of Phytophthora cinnamomi identified via RNA-Seq analysis of pre-infection structuresSemantic proximity Read ↗

Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis.Semantic proximity Read ↗

Ensembl Plants: Integrating Tools for Visualizing, Mining, and Analyzing Plant Genomic Data.Semantic proximity Read ↗

Draft genomes of two Australian strains of the plant pathogen, Phytophthora cinnamomiSemantic proximity Read ↗

PHI-base in 2022: a multi-species phenotype database for Pathogen-Host Interactions.Semantic proximity Read ↗

Complete genome sequences of bacterial pathogens in the UK Plant Health Risk RegisterSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.